Representing Symmetry Operations
Coordinate transformation matrices form the basis of group theory in crystallography.
1. Proper Rotation (Cn)
Consider a point $(x, y)$ and position vector $r$ making angle $\theta$ with the x-axis.
If rotated counter-clockwise by angle $\phi$ to $(x_1, y_1)$:
Substituting $x$ and $y$ gives the transformation matrix:
General Matrix Determination
- Determine from a drawing how basis vectors transform under the operation.
- Write the transformed vector as a linear combination of untransformed vectors.
- Take coefficients of this combination and write them as columns of the matrix $D$.
n-fold rotation ($C_n$)
Rotation angle $\theta = \frac{360^\circ}{n}$, where $n \in \mathbb{I}$.
Example: 4-fold rotation ($C_4$) Group
For $C_4$, $\theta = 90^\circ$:
2. Reflection ($\sigma$) Matrices
Schoenflies symbols $\sigma$ with suffixes v, h, d imply vertical, horizontal, dihedral.
Homework Task
Derive the matrix for a general plane making an angle $\theta$ with x-axis and containing z-axis:
Introduction to Group Theory
The Rules of Symmetry
Four Conditions of a Group
Identity
The Identity element $E$ (or $I$) must be present.
Closure
Product of any two elements is also an element in the group.
Ex: $C_4^2 \times C_4 = C_4^3$
Inverse
Every element must have an inverse. If $A \times B = E$, then $A^{-1} = B$.
Ex: $(C_4^3)^{-1} = C_4$
Associativity
$(AB)C = A(BC)$
Ex: $(C_4^3 \times C_4) \times C_4^2 = C_4^3 \times (C_4 \times C_4^2)$
Multiplication Tables
Crucial Observation: Every element of the group occurs exactly once in every row and every column.
Group $C_4 = \{E, C_4, C_4^2, C_4^3\}$
| $E$ | $C_4$ | $C_2$ ($C_4^2$) | $C_4^3$ | |
|---|---|---|---|---|
| $E$ | $E$ | $C_4$ | $C_2$ | $C_4^3$ |
| $C_4$ | $C_4$ | $C_2$ | $C_4^3$ | $E$ |
| $C_2$ | $C_2$ | $C_4^3$ | $E$ | $C_4$ |
| $C_4^3$ | $C_4^3$ | $E$ | $C_4$ | $C_2$ |
Group $C_s = \{E, \sigma\}$
(s = Spiegel = mirror in German)
| $E$ | $\sigma$ | |
|---|---|---|
| $E$ | $E$ | $\sigma$ |
| $\sigma$ | $\sigma$ | $E$ |
3. Inversion (Center of Symmetry)
Consider the inversion of vector $r$ about the Origin $O (0,0)$. For every point $(x, y, z)$, inversion projects it through the origin to $(-x, -y, -z)$.
Schoenflies Symbol
$i$
Transformation Matrix ($i$):
Vector Inversion Visualization
Group Denoted by $C_i = \{E, i\}$
Applying inversion twice brings the system back to the original state ($i^2 = E$).
| $E$ | $i$ | |
|---|---|---|
| $E$ | $E$ | $i$ |
| $i$ | $i$ | $E$ |
4. Roto-Reflection ($S_n$)
A type of Improper Rotation
Definition: Rotation ($C_n$) followed by Reflection ($\sigma_h$).
The reflection plane is represented as $\sigma_h$ (horizontal) because the rotation axis $C_n$ is considered normal to the plane of the slide, and the reflection plane by definition of roto-reflection is normal to the rotation axis.
The transformation matrix is a product of individual matrices for rotation and reflection.
The Equivalence Theorem
Roto-reflection $\equiv$ Roto-inversion
Rotation by $\theta$ + Reflection $\equiv$ Rotation by $(\theta + 180^\circ)$ + Inversion
Vertex Tracker
Watch where Vertex A ends up.
1. Roto-Reflection ($S_4$)
- Rotate 90° around Y-axis.
- Reflect across horizontal XZ plane.
2. Roto-Inversion ($\bar{4}$)
- Rotate 270° (90+180) around Y.
- Invert through the origin.
Multiplication Table for set $\{E, S_4, S_4^2, S_4^3\}$
| $E$ | $S_4$ | $S_4^2$ | $S_4^3$ | |
|---|---|---|---|---|
| $E$ | $E$ | $S_4$ | $S_4^2$ | $S_4^3$ |
| $S_4$ | $S_4$ | $S_4^2$ | $S_4^3$ | $E$ |
| $S_4^2$ | $S_4^2$ | $S_4^3$ | $E$ | $S_4$ |
| $S_4^3$ | $S_4^3$ | $E$ | $S_4$ | $S_4^2$ |
Symmetry of Staggered Ethane
Exploring the complete $D_{3d}$ point group symmetry of the staggered conformation of Ethane ($C_2H_6$).
Animate All 12 Symmetry Operations
Click any button to view the exact mathematical transformation from the initial state.
Complete Set of Symmetry Elements ($D_{3d}$ Point Group)
$\{ E, 2C_3, 3C_2, i, 2S_6, 3\sigma_d \}$
Notice how the visualizer includes the 3 orange $C_2$ axes intersecting the midpoint, and the 3 blue $\sigma_d$ planes which bisect the angles between those axes.
Did It Sink In? - 2
Test your mastery of Inversion, Roto-reflection, and Group Theory axioms.